Table 6 The prediction performance of different methods on the EVA benchmark datasets.
EVA_Set1 (80 proteins) | Q 3 | ERRsig Q 3 | sov | ERRsig sov | sovH | sovE | sovC |
|---|---|---|---|---|---|---|---|
SymPred | 78.8 | ±1.4 | 76.4 | ±1.9 | 85.0 | 76.5 | 70.4 |
SAM-T99sec | 77.2 | ±1.2 | 74.6 | ±1.5 | 80.9 | 72.5 | 71.2 |
PSIPRED | 76.8 | ±1.4 | 75.4 | ±2.0 | 82.1 | 72.3 | 65.2 |
PROFsec | 75.5 | ±1.4 | 74.9 | ±1.9 | 78.3 | 75.9 | 71.3 |
PHDpsi | 73.4 | ±1.4 | 69.5 | ±1.9 | 73.7 | 73.9 | 65.2 |
EVA_Set2 (212 proteins) | Q 3 | ERRsig Q 3 | sov | ERRsig sov | sovH | sovE | sovC |
SymPred | 79.2 | ±0.9 | 76.0 | ±1.2 | 85.1 | 77.7 | 71.3 |
PSIPRED | 77.8 | ±0.8 | 75.4 | ±1.1 | 80.6 | 72.6 | 70.4 |
PROFsec | 76.7 | ±0.8 | 74.8 | ±1.1 | 79.2 | 76.2 | 71.8 |
PHDpsi | 75.0 | ±0.8 | 70.9 | ±1.2 | 77.0 | 72.4 | 67.0 |