Table 3 Overlapped differential probes of MeDIP with MMASS-v1 and MMASS-v2 with a decreasing B value cutoff.
From: Systematic evaluation of genome-wide methylated DNA enrichment using a CpG island array
B value (MeDIP) | > 0 | > -1 | > -2 | > -3 | > -4 | > -5 | > -6 |
|---|---|---|---|---|---|---|---|
Overlapped probes with MMASS-v1&MMASS-v2 | 102 | 123 | 148 | 182 | 231 | 289 | 389 |
Total differential probes | 184 | 238 | 308 | 418 | 615 | 1000 | 1788 |
Percentage | 55.43% | 51.68% | 48.05% | 43.54% | 37.56% | 28.90% | 21.76% |