Table 1 Statistics of horn fly EST assembly.
From: Functional genomics of the horn fly, Haematobia irritans (Linnaeus, 1758)
Number of sequences | 2,462 |
|---|---|
Mean length ± S.D. before vector stripping | 877 ± 44 bp |
Mean length ± S.D. after vector stripping | 653 ± 32 bp |
High quality EST reads | 2,160 |
Assembled ESTs | 2,160 |
No. unigenes | 992 |
Mean length ± S.D. | 758 ± 46 bp |
No. unigenes with more than 20 ESTs | 13 |
No. unigenes with 5-20 ESTs | 44 |
No. unigenes with less than 5 ESTs | 935 |
No. contigs | 178 |
No. singlets | 814 |
Novelty (unigenes/assembled ESTs) | 46% |
Redundancy (1-Novelty) | 54% |