Figure 5
From: Strain-specific copy number variation in the intelectin locus on the 129 mouse chromosome 1
Evidence for copy number variation in three mouse strains. Coverages of the paired-end reads for the three strains, C57BL/6NJ (red), CAST/EiJ (green) and 129S1/SvImJ (blue), were plotted along the Itln locus of the reference mouse genome and they were superimposed on top of one another. The mean mapped coverage (horizontal line) of the three genomes is about 20x. Coverage of C57BL/6NJ's Itln locus was consistent with the mean mapped genome coverage while those of the other 2 strains were expanded to different degrees. Reads that were mapped onto repeat elements were reported once and resulted in regions showing coverages similar to the mean mapped genome coverage.