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Table 1 Prediction of RIFIN and STEVOR proteins in 15 draft genome datasets

From: RSpred, a set of Hidden Markov Models to detect and classify the RIFIN and STEVOR proteins of Plasmodium falciparum

Dataset Size A-RIFIN B-RIFIN B1-RIFIN B2-RIFIN RIFIN STEVOR STEVOR-like Total
7G8 21756 32 13 0 2 20 9 4 80
D10 18305 31 9 1 2 12 15 6 76
D6 17468 37 19 2 2 21 15 4 100
sDD2 21348 84 33 4 4 29 30 7 191
FCC-2_hainan 20080 44 15 2 0 26 14 5 106
HB3 21641 94 21 7 1 17 31 6 177
IGH-CR14 20321 107 39 6 5 12 33 9 211
IT-strain 20215 82 29 5 3 20 33 7 179
K1 16559 42 15 5 3 25 16 6 112
P_reichenowi 6957 124 45 11 10 60 32 4 286
RAJ116 17252 45 18 4 2 22 3 2 96
RO-33 20632 59 14 3 4 28 20 7 135
Santa_Lucia (SL) 16889 43 8 2 1 24 10 4 92
Senegal_v34.04 15786 59 10 1 1 30 17 4 122
VS_1 24738 71 34 5 3 39 25 10 187
  1. All CDS, equal to or larger than 100 amino acids in length, from publically available draft genomes were scored with RSPred.