Table 2 Summary of genome-wide studies of cattle copy number variations
From: Genomic characteristics of cattle copy number variations
Study | Assay | Count | CNVR | Size | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Â | Â | Marker | Sample | Breed | Type | Count | Range (kb) | Median (kb) | Mean (kb) | Total (Mb) |
Matukumalli et al. 2009 | BovineSNP50 | 54,001 | 556 | 21 | Deletion only | 51a | 22.92-11,050.69 | 394.87 | 960.67 | 49.0 |
Liu et al. 2010 | Array CGH | ~385,000 | 90 | 17 | Deletion, insertion | 163b | 18.00-1,261.90 | 86.19 | 153.75 | 25.1 |
Bae et al. 2010 | BovineSNP50 | 54,001 | 265 | 1 | Deletion, insertion | 368 | 25.35-967.18 | 128.33 | 171.49 | 63.1 |
Fadista et al. 2010 | Array CGH | ~6,300,000 | 20 | 4 | Deletion, insertion | 254c | 1.72-2,031.34 | 15.51 | 62.26 | 15.8 |
This study | BovineSNP50 | 56,947 | 521 | 21 | Deletion, insertion | 682 | 32.57-5,569.09 | 131.18 | 204.97 | 139.8 |