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Figure 2 | BMC Genomics

Figure 2

From: Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds

Figure 2

Characteristics of homology search of unigenes against the NR database. (a) Effects of query sequence length on percentage of significant matches. The cut-off value was set at 1.0e-5. The proportion of sequences with matches in the NR database at NCBI is greater among the longer assembled sequences. (b) E-value distribution of the top BLAST hits for each unigene (E-value of 1.0e-5). (c) Similarity distribution of the best BLAST hits for each unigene. (d) Species distribution is shown as the percentage of the total homologous sequences (with an E-value ≤ 1.0e-5). We used all plant proteins in the NCBI NR database for homology search and extracted the best hit of each sequence for analysis.

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BMC Genomics

ISSN: 1471-2164

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