Table 4 Read counts for the 8 lanes as mapped with Bowtie
From: Composite transcriptome assembly of RNA-seq data in a sheep model for delayed bone healing
Sheep (%) | Cow (%) | |||||||
|---|---|---|---|---|---|---|---|---|
lane | reads | mapped reads | % | annot | unannot | de novo | annot | unannot |
1 | 22,145,090 | 17,127,532 | 77.3 | 11.8 | 0.1 | 51.2 | 35.4 | 1.5 |
2 | 23,356,043 | 17,964,339 | 76.9 | 11.5 | 0.1 | 51.4 | 35.5 | 1.5 |
3 | 27,617,415 | 17,964,339 | 76.3 | 10.8 | 0.4 | 48.7 | 38.6 | 1.5 |
4 | 20,234,612 | 14,980,730 | 74.0 | 10.5 | 0.1 | 47.6 | 40.4 | 1.3 |
5 | 24,793,840 | 18,367,757 | 74.1 | 12.1 | 0.2 | 48.4 | 37.6 | 1.7 |
6 | 18,894,344 | 13,810,552 | 73.1 | 11.0 | 0.1 | 48.6 | 38.7 | 1.5 |
7 | 18,788,777 | 13,599,338 | 73.1 | 12.1 | 0.2 | 49.6 | 36.7 | 1.4 |
8 | 21,722,529 | 14,276,174 | 65.7 | 11.8 | 0.2 | 48.2 | 38.2 | 1.5 |