From: Analysis of the unexplored features of rrs (16S rDNA) of the Genus Clostridium
Clostridium sp. | Signature | ||
---|---|---|---|
 | Nucleotide sequence (30 nts) | No.a | Frequencyb |
C. beijerinckii | ATATCTAGAGTGCAGGAGAGCAAAGTAGAA | M10 | 23/23 |
C. sporogenes | AATCGCATGATTATCTTATCAAAGATTTAT | M1 | 11/11 |
C. butyricum | ACTTGACATCTCCTGAATTACTCTGTAATG | M3 | 32/32 |
 | TACAATGGTCGGTACAATGAGATGCAACCT | M9 | 32/32 |
C. colicanis | AAAGGGAGATTAATACCTCATAATATCCTA | M1 | 9/9 |
 | AAAACTTTAAAACCGGTCTCAGTTCGGATT | M3 | 9/9 |
 | ATACATGGATTAAAGGAGCAATCCGCTATA | M5 | 9/9 |
 | TAGGCGGATCTTTAAGTGGGATGTGAAATA | M9 | 9/9 |
C. kluyveri | AGATTAATACCGCATAGAAGGTAAAAATCG | M2 | 14/14 |
 | AGGCGGATATTTAAGTGAGATGTGAAAGAC | M4 | 14/14 |
 | AGTGCATTTCAAACTGGATATCTAGAGTGC | M5 | 14/14 |
 | AAATCTCAAAAACTGCCCCCAGTTCGGATT | M9 | 14/14 |
 | AAGAAGGTTTTCGGATCGTAAAGCTCTGTC | M10 | 14/14 |
C. pasteurianum | CGAAAGGGAGATTAATACCGCATAATATTA | M2 | 13/13 |
 | AAATGCGTAGAGATTAGGAAGAACATCAGT | M3 | 13/13 |
 | ATTGTAAAGCTCTGTCTTTTGGGACGATAA | M5 | 13/13 |
 | TAAACGATGAGTACTAGGTGTAGGAGGTAT | M7 | 13/13 |
 | TACAATGGTGAGAACAACGAGATGCAATAC | M8 | 13/13 |
C. perfringens | TTAGTTACTACCATTAAGTTGAGGACTCTA | M1 | 92/92 |
 | ACACTTGACATCCCTTGCATTACTCTTAAT | M2 | 92/92 |
 | TAGGCGGATGATTAAGTGGGATGTGAAATA | M3 | 92/92 |
 | AAGGTTTTCGGATCGTAAAGCTCTGTCTTT | M4 | 92/92 |
 | TTATGTGTAGGGCTACACACGTGCTACAAT | M5 | 92/92 |
C. chauvoei | AAAGGAAGATTAATACCGCATAATATTGCA | M1 | 8/8 |
 | AGACTTGACATCTCCTGCATTACTCTTAAT | M3 | 8/8 |
 | AGTAATTAAAGGAGCAATCCGCTACAAGAT | M4 | 8/8 |
 | TAAACTATAATACTTGTCTCAGTTCGGATT | M5 | 8/8 |
 | AACTTGGGTGCTGCATTTCAAACTGGAAGT | M8 | 8/8 |
 | AAGGTTTTCGGATCGTAAAGCTCTGTCTTC | M9 | 8/8 |
C. tetani | AACCCTTATTATTAGTTGCTACCATTAAGT | M1 | 8/8 |
 | TTAAGTGAGATGTGAAATACCTAAGCTTAA | M2 | 8/8 |
 | AAAGGAGGATTAATACCGCATAAAGTTAAG | M3 | 8/8 |
 | TTTAACCAAAGGAGTAATCTGCTTTGAGAT | M4 | 8/8 |
 | AGTTGCTAGTAATCGCAAATCAGAATGTTG | M5 | 8/8 |
 | TTCTGTGCCGCAGTTAACACATTAAGTATT | M6 | 8/8 |
 | AAATCTCAAAAACCGATCCCAGTTCGGATT | M7 | 8/8 |
 | AAGGTTTTCGGATCGTAAAACCCTGTTTTC | M8 | 8/8 |
 | ACGGTCGCAAGACTAAAACTCAAAGGAATT | M9 | 8/8 |
C. baratii c | TTGTAAAGCTCTGTCTTTGGGGACGATAAT | M3 | 8/8 |
 | ATTTTTAAGTGGGATGTGAAATACCCGGGC | M6 | 8/8 |
C. sardiniense c | AAAGGAAGATTAATACCGCATAACATTGCA | M1 | 9/9 |
 | TAAACTTCAAAACTTGTCTCAGTTCGGATT | M2 | 9/9 |
 | TTCGCATGAAACAGCAATTAAAGGAGCAAT | M4 | 9/9 |
 | CTACAATGGCAAGTACAGAGAGATGCAATA | M9 | 9/9 |
 | GTAAACGATGAATACTAGGTGTAGGGGTTT | M10 | 9/9 |
C. botulinum (CBoI - 83/128) c,d | AAAACTTATAAAACCTATCTCAGTTCGGAT | M1 | 82/83 |
 | AACCCTTGTTATTAGTTGCTACCATTAAGT | M2 | 83/83 |
 | AAGGTCTTCGGATTGTAAAGCCCTGTTTTC | M7 | 83/83 |
 | GTAGGCGGATGTTTAAGTGGGATGTGAAAT TAAACGATGGATACTAGGTGTAGGGGGTAT | M8 M9 | 83/83 82/83 |
C. novyi c | AAAGGGAGATTAATACCGCATAACATTATT | M1 | 17/17 |
 | AAGATTAAAACTCAAAGGAATTGACGGGGA | M3 | 17/17 |
 | ACTTTCTGGACTGTAACTGACACTGAGATA | M6 | 17/17 |
 | TTAAGTCAGATGTGAAATTCCCGGGCTTAA | M10 | 17/17 |
C. subterminale c | AATGAAGAAGGCCTTAGGGTTGTAAAGTTC | M6 | 8/8 |
C. acetobutylicum | No unique signature could be found | - | 24/24 |