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Table 1 Summary of genotyping results of microsatellite markers isolated from BAC end sequences for integration between the genetic and physical maps

From: A first generation integrated map of the rainbow trout genome

No. of markers identified 205 (from 117 contigs)
Informative for linkage analysis 128 (63%; 88 contigs; 129 loci)
Mapped to linkage groups 127 loci (98.5%; 88 contigs)
PCR optimization failed 58 (28%)
Monomorphic in mapping panel 10 (5%)
Duplicated 15 (9 informative for mapping and 6 non-informative)
Redundancy in contig coverage (optimized, but panel not genotyped) 3 markers