Table 1 Summary of genotyping results of microsatellite markers isolated from BAC end sequences for integration between the genetic and physical maps
From: A first generation integrated map of the rainbow trout genome
No. of markers identified | 205 (from 117 contigs) |
Informative for linkage analysis | 128 (63%; 88 contigs; 129 loci) |
Mapped to linkage groups | 127 loci (98.5%; 88 contigs) |
PCR optimization failed | 58 (28%) |
Monomorphic in mapping panel | 10 (5%) |
Duplicated | 15 (9 informative for mapping and 6 non-informative) |
Redundancy in contig coverage (optimized, but panel not genotyped) | 3 markers |