Profiling the venom gland transcriptomes of Costa Rican snakes by 454 pyrosequencing

BMC Genomics

Table 2 Relative contribution of the different venom protein family hits in each of the Costa Rican snake venom gland transcriptome

	C. simus		B. asper(Car)		B. asper(Pac)		C. godmani		A. picadoi		A. mexicanus		B. schlegelii		B. lateralis
	Reads	%	Reads	%	Reads	%	Reads	%	Reads	%	Reads	%	Reads	%	Reads	%
BPP	178	13.4	4232	15.0	169	12.2	818	8.3	1634	16.4	406	13.0	444	15.3	1350	23.6
CRISP	0	0	245	0.8	3	0.2	253	2.6	261	2.6	17	0.5	105	3.6	182	3.2
CTL	32	2.4	287	1.0	19	1.3	23	0.2	476	4.8	15	0.5	7	0.2	180	3.1
GF	60	4.5	275	0.9	38	2.7	64	0.6	56	0.6	50	1.6	142	4.9	103	1.8
LAO	50	3.8	1197	4.2	33	2.4	537	5.5	308	3.1	121	3.9	92	3.2	197	3.4
PLA₂	161	12.1	5026	17.8	195	14.2	777	7.9	228	2.3	224	7.2	278	9.6	176	3.0
SVMP	86	6.5	11733	41.6	559	40.6	4144	42.2	5583	56.1	1204	38.7	762	26.3	2575	44.9
SP	373	28.1	3790	13.4	114	8.3	2770	28.1	1089	10.9	692	22.2	594	20.5	597	10.4
5'-NTase	3	0.2	214	0.7	3	0.2	67	0.7	13	0.1	27	0.8	5	0.17	42	0.7
PDE	3	0.2	56	0.2	3	0.2	13	0.1	8	0.08	0	0	2	0.06	33	0.6
GC	5	0.4	108	0.4	4	0.3	32	0.3	13	0.1	7	0.2	0	0	1	0.02
CVF	2	0.15	2	0.006	0	0	1	0.01	0	0	2	0.06	1	0.03	0	0
CRO	0	0	10	0.03	4	0.3	2	0.02	4	0.04	0	0	1	0.03	1	0.02
SARA	1	0.07	2	0.006	0	0	0	0	0	0	0	0	0	0	0	0
WAP	0	0	26	0.09	0	0	0	0	0	0	0	0	0	0	0	0
KUN	2	0.15	10	0.03	3	0.2	0	0	1	0.01	0	0	4	0.12	1	0.02
KAZ	0	0	0	0	0	0	0	0	0	0	0	0	9	0.3	12	0.2
HYA	3	0.2	7	0.02	1	0.07	4	0.04	1	0.01	1	0.03	5	0.17	2	0.03
OHA	199	15.0	779	2.8	165	11.9	256	2.	233	2.3	254	8.2	338	11.6	188	3.3
3FTx	169	12.7	221	0.8	65	4.7	63	0.6	43	0.4	89	2.8	104	3.6	91	1.6

ISSN: 1471-2164