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Table 4 Statistics for assayed SNVs in the different collections.

From: ngs_backbone: a pipeline for read cleaning, mapping and SNP calling using Next Generation Sequence

  SNVs HRM detected % Polymorphic markers Average frequency b PIC c
SA 14 -- 21.4 0.98 0.04
IL 14 12 41.7 0.95 0.09
CO 33 28 71.4 0.85 0.22
PO 15 13 69.2 0.80 0.28
  1. a Percentage of polymorphic markers: number of polymorphic markers with respect to detected HRM markers or total markers for each set.
  2. b Average frequency of most frequent allele of all detected markers or total markers for each set.
  3. c PIC (polymorphic information index) of all detected markers or total markers for each set.
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