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Table 5 Association of appressoria small RNAs with ESTs and ESS.

From: Diverse and tissue-enriched small RNAs in the plant pathogenic fungus, Magnaporthe oryzae

  Genomea Intergenica Genesb
  Read Countc Featuresd Read Count Features Read Count Features
ESSe 5608 2249 29 - 1575 518
   MPSS 900 88 5 - 401 39
MYC 817 49 4 - 325 21
APP 764 39 4 - 378 19
   SAGE 1188 62 10 - 431 26
   CPA-sRNA 5461 2099 20 - 1477 455
EST 4310 3436 11 - 1618 1770
EST or ESS 6018 3865 35 - 1953 2033
  1. a Small RNAs that overlap the sequence of ESS and/or ESTs at the same genome or intergenic location.
  2. b Small RNAs that map to transcriptionally (ESS and/or EST) supported gene loci.
  3. c Number of small RNAs that map to a given feature and containing ESS and/or EST transcriptional evidence.
  4. d Number of features containing ESS and/or EST evidence associated with small RNAs.
  5. e ESS (Expressed Short Sequence) are either MPSS, SAGE or CPA-sRNA.