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Table 1 Summary statistics of the RAD tags sequencing via Illumina (San Diego, CA)

From: Identification of SNP and SSR markers in eggplant using RAD tag sequencing

Feature 305E40 67/3
Illumina reads (million) 10.90 12.12
Mb of sequences 13.30 13.82
Total Mb after sequence editing 17.50
Contigs 38,935 38,941
Average contig length (bp) 351 368
N501 (bp) 362 382
Contig length range (bp, min-max) 218-585 218-579
Singlets 6,912 6,843
Common Contigs between parents 31,635
Number of sequences with SNPs 5,174
Total SNPs (frequency) 10,089 (1/1,241 bp)
Total InDels (frequency) 874 (1/14,325 bp)
  1. 1N50: weighted median statistic such that 50% of the entire assembly is contained in the number of contigs equal to or greater than this value