Identification of novel soybean microRNAs involved in abiotic and biotic stresses

BMC Genomics

Table 3 New Glycine max miRNA families conserved in other plants species.

Family	Acronym	miRNA Sequence	Size (nt)	Species
MIR170	gma-MIR170	UAUUGGCCUGGUUCACUCAGA	21	ath, aly
MIR395	gma-MIR395a	CUGAAGUGUUUGGGGGAACUC	21	ath, ptc, vvi, sly, rco, aly, csi, osa,
	gma-MIR395b	CUGAAGUGUUUGGGGGAACUC	21	sbi, mtr, zma, tae, pab
	gma-MIR395c	CUGAAGUGUUUGGGGGAACUC	21
MIR397	gma-MIR397a	UCAUUGAGUGCAGCGUUGAUG	21	ath, osa, ptc, bna, vvi, sbi, bdi, rco,
	gma-MIR397b	UCAUUGAGUGCAGCGUUGAUG	21	aly, csi, zma, pab, sly, hvu
MIR408	gma-MIR408a	AUGCACUGCCUCUUCCCUGGC	21	ath, ptc, pta, vvi, ahy, aly, csi, osa,
	gma-MIR408b-5p	CUGGGAACAGGCAGGGCACG	20	sof, zma, ppt, smo,
	gma-MIR408b-3p	AUGCACUGCCUCUUCCCUGGC	21	tae, sbi, bdi, rco, aqc
	gma-MIR408c	AUGCACUGCCUCUUCCCUGGC	21
MIR2118	gma-MIR2118a-5p	GGAGAUGGGAGGGUCGGUAAAG	22
	gma-MIR2118a-3p	UUGCCGAUUCCACCCAUUCCUA	22	pvc, gso, mtr, osa, zma
	gma-MIR2118b-5p	GGAGAUGGGAGGGUCGGUAA	20
	gma-MIR2118b-3p	UUGCCGAUUCCACCCAUUCCUA	22
MIR3522	gma-MIR3522a	UGAGACCAAAUGAGCAGCUGA	21	gso

Arabidopsis lyrata (aly), Arabidopsis thaliana (ath), Brassica napus (bna), Ricinus communis (rco), Medicago truncatula (mtr), Phaseolus vulgaris (pvu), Arachis hypogaea (ahy), Glycine soja (gso), Aquilegia coerulea (aqc), Seleginella moellendorffii (smo), Physcomitrella patens (ppt), Pinus taeda (pta), Picea abies (pab), Populus trichocarpa (ptc), Citrus sinensis (csi), Vitis vinifera (vvi), Solanum lycopersicum (sly), Brachypodium distachyon (bdi), Hordeum vulgare (hvu), Oryza sativa (osa), Saccharum officinarum (sof), Selaginella moellendorffii (smo), Sorghum bicolor (sbi), Triticum aestivum (tae), and Zea mays (zma).

ISSN: 1471-2164