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Table 2 Distribution of Simple Sequence Repeats in trout BAC end sequences.

From: Analysis of BAC-end sequences in rainbow trout: Content characterization and assessment of synteny between trout and other fish genomes

Repeat

Type

Number

Repeat

Type

Number

Monomer

A/T

71

Tetramer

CACA/TGTG

38

 

C/G

1

 

TCTG/CAGA

37

Dimer

TG/CA

1346

 

TATG/CATA

26

 

AC/GT

1238

 

AGAC/GTCT

38

 

GA/TC

607

 

GAGA/TCTC

24

 

TA/TA

505

 

ACAT/ATGT

22

 

AG/CT

498

 

AGAA/TTCT

17

 

AT/AT

311

 

Other

370

Trimer

AAC/GTT

5

Pentamer

TCAAA/TTTGA

19

 

CAT/ATG

13

 

ATTTG/CAAAT

15

 

AAT/ATT

36

 

Other

92

 

ATA/TAT

36

Hexamer

 

356

 

TTA/TAA

24

Heptamer

 

80

 

Other

55

Octomer

 

278

Tetramer

ACAC/GTGT

26

Nanomer

 

144

 

TGTA/TACA

66

Decamer

 

478

 

ATAC/GTAT

23

   
 

CTCA/TGAG

25

Total

 

6,920