MicroRNA genes preferentially expressed in dendritic cells contain sites for conserved transcription factor binding motifs in their promoters

Table 1 MicroRNAs rescreened after primary screen in monocytes and dendritic cells, and their differences in expression level between cell types

MicroRNA in assay	Mature miRNA Sequence	Current genomic entries in miRbase matching mature miRNA	Up in DC	Up in DC subset	Up in monocytes	No difference
hsa-let-7e	UGAGGUAGGAGGUUGUAUAGU	same	X
hsa-miR-15b	UAGCAGCACAUCAUGGUUUACA	same			X
hsa-miR-16	UAGCAGCACGUAAAUAUUGGCG	hsa-miR-16-1, hsa-miR-16-2			X
hsa-miR-27a	UUCACAGUGGCUAAGUUCCGCC	same				X
hsa- miR-27b	UUCACAGUGGCUAAGUUCUG	same				X
hsa-miR-34a	UGGCAGUGUCUUAGCUGGUUGU	same	X
hsa-miR-99a	AACCCGUAGAUCCGAUCUUGUG	same	X
hsa-miR-100	AACCCGUAGAUCCGAACUUGUG	same	X
hsa-miR-125a	UCCCUGAGACCCUUUAACCUGUG	same	X
hsa-miR-125b	UCCCUGAGACCCUAACUUGUGA	hsa-miR-125b-1, hsa-miR-125b-2	X
hsa-miR-126	UCGUACCGUGAGUAAUAAUGC	same				X
hsa-miR-130a	CAGUGCAAUGUUAAAAGGGC	same			X
hsa-miR-132	UAACAGUCUACAGCCAUGGUCG	same				X
hsa-miR-135a	UAUGGCUUUUUAUUCCUAUGUGA	hsa-miR-135a-1, hsa-miR-135a-2	X
hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG	same	X
hsa-miR-140	AGUGGUUUUACCCUAUGGUAG	same				X
hsa-miR-146	UGAGAACUGAAUUCCAUGGGUU	hsa-miR-146a		X
hsa-miR-150	UCUCCCAACCCUUGUACCAGUG	same			X
hsa-miR-155	UUAAUGCUAAUCGUGAUAGGGG	same		X
hsa-miR-186	CAAAGAAUUCUCCUUUUGGGCUU	same				X
hsa-miR-199b	CCCAGUGUUUAGACUAUCUGUUC	same			X
hsa-miR-199-s	CCCAGUGUUCAGACUACCUGUU	hsa-miR-199a-1, hsa-miR-199a-2			X
hsa-miR-210	CUGUGCGUGUGACAGCGGCUG	same		X

ISSN: 1471-2164