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Table 1 Data sets for our analyses.

From: Immunogenicity of autoantigens

Data set # known genes mean exon length (nt) References/Description
CIDB-Serex-AG 1471 5179 http://ludwig-sun5.unil.ch/CancerImmunomeDB/
Exp-Serex-HAG 85 6266 collected by Prof. Meese's group
Exp-Serex-TAG 74 5986 collected by Prof. Meese's group
Exp-Chip-AG 298 4355 collected by Prof. Meese's group
Lit-PhageDisplay-TAG 84 4782 collected by Prof. Meese's group
Lit-AAG 348 4710 http://www.wiley-vch.de/contents/jc_2040/2005/25481_s.pdf
ALL 2079 4906 union of the above antigen sets
ProteinCodingGenes 23583 3812 all protein coding genes retrieved from NCB1 excluding the above antigens
ProteinCodingGenesLongerExons 8816 5842 corresponds to ProteinCodingGenes with genes having exon lengths > 3100 nucleotides
  1. These data sets are also available online: http://genetrail.bioinf.uni-sb.de/paper/ags/