Table 4 Statistics of DGE sequencing
Summary | Â | 3 DAF | 50 DAF | 70 DAF |
|---|---|---|---|---|
Raw Data | Total | 3510563 | 3738193 | 3784929 |
Raw Data | Distinct Tag | 207988 | 202720 | 184923 |
Clean Tag | Total number | 3382707 | 3612715 | 3682563 |
Clean Tag | Distinct Tag number | 87140 | 85737 | 91130 |
All Tag Mapping to Gene | Total number | 1573645 | 1237119 | 1379598 |
All Tag Mapping to Gene | Total % of clean tag | 46.52% | 34.24% | 37.46% |
All Tag Mapping to Gene | Distinct Tag number | 46700 | 46865 | 51320 |
All Tag Mapping to Gene | Distinct Tag % of clean tag | 53.59% | 54.66% | 56.32% |
Unambiguous Tag Mapping to Gene | Total number | 1566698 | 1233379 | 1376138 |
Unambiguous Tag Mapping to Gene | Total % of clean tag | 46.31% | 34.14% | 37.37% |
Unambiguous Tag Mapping to Gene | Distinct Tag number | 46520 | 46689 | 51138 |
Unambiguous Tag Mapping to Gene | Distinct Tag % of clean tag | 53.39% | 54.46% | 56.12% |
All Tag-mapped Genes | number | 19607 | 21534 | 21865 |
All Tag-mapped Genes | % of ref genes | 44.67% | 49.06% | 49.82% |
Unambiguous Tag-mapped Genes | number | 19492 | 21406 | 21761 |
Unambiguous Tag-mapped Genes | % of ref genes | 44.41% | 48.77% | 49.58% |
Unknown Tag | Total number | 1809062 | 2375596 | 2302965 |
Unknown Tag | Total % of clean tag | 53.48% | 65.76% | 62.54% |
Unknown Tag | Distinct Tag number | 40440 | 38872 | 39810 |
Unknown Tag | Distinct Tag % of clean tag | 46.41% | 45.34% | 43.68% |