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Table 4 List of consensus peptides specific to putative isoforms with a FDR < 2%

From: Identification of alternative splice variants in Aspergillus flavus through comparison of multiple tandem MS search algorithms

Gene ID Gene Description Peptide Specific to Putative Isoform Mascot
Prot
Score
Mascot
Pep E-value
OMSSA
E-value
OMSSA
p-value
X!Tandem
Prot
Expect
X!Tandem
Pep
Expect
InsPecT
MQ
Score
InsPecT
p-value
7910490 prefoldin subunit 6 AEILQYQSQMQQQAAAASASA 69 3.1E-06 4.2E-04 1.6E-06 n.a. n.a. 0.921 4.8E-03
7912171 peroxiredoxin VENNDILFLSDPDAK 145 1.1E-09 2.8E-09 1.1E-11 -7.7 8.5E-04 n.a. n.a.
   VSGAEAVLAHL 145 6.6E-07 6.2E-06 6.1E-08 -7.7 1.6E-02 2.728 1.0E-05
7914158 hypothetical protein ENALEAGQVVAVLAEGK 187 1.1E-10 4.7E-12 1.9E-14 n.a. n.a. 3.375 1.0E-05
   LPEKENALEAGQVVAVLAEGK 187 4.3E-05 1.4E-05 1.3E-07 -3 9.3E-04 n.a. n.a.
7914461 UTP-glucose-1-phosphate uridylyltransferase Ugp1 APATETSNAGSFGK 296 2.5E-09 2.0E-04 1.0E-06 -15.6 5.0E-05 2.791 1.0E-05
7914540 conserved hypothetical protein EFEDAAFALQPGQVSGIVDTASGVHLIER 109 3.2E-06 2.1E-07 6.4E-10 -7.2 4.2E-03 n.a. n.a.
   SKEEAIEILR 109 1.4E-04 4.3E-03 1.7E-05 -7.2 1.0E-02 1.705 1.0E-05
7916030 cyclophilin SGELESEDKGSHEEL 216 4.0E-05 2.4E-03 2.8E-05 -1.7 2.0E-02 2.184 1.0E-05
7918378 14-3-3 family protein ArtA EEAPAAEGEKPAAE 380 1.0E-07 1.5E-04 9.8E-07 -27.3 4.5E-04 1.901 1.0E-05
   KEEAPAAEGEKPAAE 380 2.8E-11 4.2E-08 1.7E-10 -27.3 6.8E-07 2.991 1.0E-05
7919242 conserved hypothetical protein VADVGTGTAIWLTDLAK 130 1.3E-09 1.6E-10 1.4E-12 -9.9 1.3E-05 3.067 1.0E-05
7919622 phosphofructokinase NDQTSTIYSTTEIANIIK 61 4.1E-06 2.0E-06 1.2E-08 -3.4 3.9E-04 n.a. n.a.
7919639 UDP-glucose 4-epimerase FAVETAITDVINAQR 710 1.8E-12 2.7E-10 1.5E-12 -25.4 2.4E-06 2.187 1.0E-05
7919713 14-3-3 protein sigma, gamma, zeta, beta/alpha DNLTLWTSSDGQEPEGAASK 129 6.8E-13 5.1E-12 2.8E-14 -8.3 5.3E-09 3.447 1.0E-05
7920463 ubiquinol-cytochrome C reductase complex core protein 2 FLSNDLPYFAELLAEVASQSK 131 3.6E-07 2.9E-09 1.3E-11 -13.4 1.4E-03 2.754 1.0E-05