Genomic organization of differentially regulated genes from chromosome Gm09 of the Glyma1 sequence. (A) All differentially expressed genes were located in a 5.16 Mb region of the distal end of chromosome Gm09. (B) Enlargement of the 5.16 Mb region showing the locations of the upregulated genes (blue) and downegulated genes (red) relative to sequence-based markers BARC-025669-04989 and Sat_293 (black) that are situated upstream and downstream, respectively, nearest the R locus in the Glyma1 sequence. Chromosome positions of differentially regulated genes are listed in Table S6. Chromosome positions of BARC-025669-04989 (Gm09:41,620,379..41,620,751) and Sat_293 (Gm09:42,848,788..42,849,068).