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Table 1 Correlation and partial correlation between log(ω) and various protein attributes

From: The non-random clustering of non-synonymous substitutions and its relationship to evolutionary rate

Attribute (X) N rlog(ω), X (p-value) rlog(ρ), X (p-value) rlog(ω), log(ρ)|X (p-value) Reference
log( ρ ) 2,897 0.40077295 (0) - -  
mRNA expression 2,701 -0.3807253 (6.7e-94) -0.2072764 (1.34e-27) 0.3558986 (0) [20]
Protein abundance 1,930 -0.3878717 (2.572e-70) -0.1586315 (2.4e-12) 0.3727785 (0) [21]
Codon adaptation index 1 2,895 -0.3741477 (7.23e-97) -0.1898758 (6.63e-25) 0.3621437 (0) [22]
Codon adaptation index 2 2,643 -0.4055142 (3.568e-105) -0.2027786 (6.31e-26) 0.3558753 (0) [23]
Dispensibility 1 1,562 0.1832102 (2.94e-13) 0.09173406 (0.000283) 0.3922312 (0) [24]
Dispensibility 2 49 -0.2296285 (0.1124) 0.01099192 (0.94025) 0.4143947 (0.00201) [25]
Sequence Length 2,895 -0.01921694 (0.301313) -0.01095773 (0.5556) 0.4006604 (0) [26]
Degree 674 -0.1502817 (8.98e-5) -0.0850535 (0.02724) 0.3938752 (0) [27]
Centrality 674 -0.0193294 (0.616415) -0.03150676 (0.414129) 0.4004375 (0) [27]
Contact density 84 0.1411473 (0.2003) 0.05072567 (0.646781) 0.3981061 (9.39e-5) [28]
Fraction buried 25% 84 0.2146396 (0.04992) 0.184923 (0.09218) 0.3761856 (0.000258) [28]
SS (helix) 84 -0.1465735 (0.18337) 0.01745651 (0.8748) 0.4077974 (5.8299e-5) [28]
SS (strand) 84 0.05027238 (0.64973) -0.05152868 (0.6416) 0.4044114 (6.90152e-5) [28]
SS (turn) 84 0.07785531 (0.48147) -0.05314373 (0.6311) 0.406718 (6.1537e-5) [28]
SS (coil) 84 -0.2148053 (0.04973) -0.02548217 (0.818) 0.4048788 (6.743566e-5) [28]