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Table 1 Correlation and partial correlation between log(ω) and various protein attributes

From: The non-random clustering of non-synonymous substitutions and its relationship to evolutionary rate

Attribute (X) N rlog(ω), X
(p-value)
rlog(ρ), X
(p-value)
rlog(ω), log(ρ)|X
(p-value)
Reference
log( ρ ) 2,897 0.40077295
(0)
- -  
mRNA expression 2,701 -0.3807253
(6.7e-94)
-0.2072764 (1.34e-27) 0.3558986
(0)
[20]
Protein abundance 1,930 -0.3878717
(2.572e-70)
-0.1586315 (2.4e-12) 0.3727785
(0)
[21]
Codon adaptation index 1 2,895 -0.3741477
(7.23e-97)
-0.1898758 (6.63e-25) 0.3621437
(0)
[22]
Codon adaptation index 2 2,643 -0.4055142
(3.568e-105)
-0.2027786 (6.31e-26) 0.3558753
(0)
[23]
Dispensibility 1 1,562 0.1832102
(2.94e-13)
0.09173406 (0.000283) 0.3922312
(0)
[24]
Dispensibility 2 49 -0.2296285
(0.1124)
0.01099192 (0.94025) 0.4143947 (0.00201) [25]
Sequence Length 2,895 -0.01921694
(0.301313)
-0.01095773 (0.5556) 0.4006604
(0)
[26]
Degree 674 -0.1502817
(8.98e-5)
-0.0850535 (0.02724) 0.3938752
(0)
[27]
Centrality 674 -0.0193294
(0.616415)
-0.03150676 (0.414129) 0.4004375
(0)
[27]
Contact density 84 0.1411473
(0.2003)
0.05072567 (0.646781) 0.3981061
(9.39e-5)
[28]
Fraction buried 25% 84 0.2146396
(0.04992)
0.184923 (0.09218) 0.3761856 (0.000258) [28]
SS (helix) 84 -0.1465735
(0.18337)
0.01745651 (0.8748) 0.4077974
(5.8299e-5)
[28]
SS (strand) 84 0.05027238
(0.64973)
-0.05152868 (0.6416) 0.4044114 (6.90152e-5) [28]
SS (turn) 84 0.07785531
(0.48147)
-0.05314373 (0.6311) 0.406718
(6.1537e-5)
[28]
SS (coil) 84 -0.2148053
(0.04973)
-0.02548217 (0.818) 0.4048788 (6.743566e-5) [28]