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Table 1 Jasmonate-dependent genes whose responsiveness to B. brassicae attack was changed in aos or fou2 mutants relative to wt.

From: Testing the importance of jasmonate signalling in induction of plant defences upon cabbage aphid (Brevicoryne brassicae) attack

    

Infested with Brevicoryne brassicae

Gene

Accession

aos /wt

fou2 /wt

wt B /wt

aosB / aos

fou2B / fou2

JA synthesis

      

   LOX2

At3g45140

-1.97

2.09

0.55

NS

-0.42

   AOC3

At3g25780

-1.26

2.36

2.19

NS

NS

   OPR3

At2g06050

-1.51

1.62

0.52

NS

-0.47

   OPCL1

At1g20510

-0.77

1.13

1.08

0.29

NS

JA signalling

      

   CORI3

At4g23600

-1.60

2.42

0.83

NS

NS

   MYC2 (JIN1)

At1g32640

-1.45

1.86

0.91

NS

-0.43

   JAZ1

At1g19180

-2.31

2.62

2.10

1.15

NS

   JAZ2

At1g74950

-0.55

1.89

0.69

NS

NS

   JAZ6

At1g72450

-1.41

2.00

0.58

NS

NS

   JAZ9

At1g70700

-1.99

2.65

0.79

NS

NS

   JAZ10

At5g13220

-0.85

3.69

1.10

NA

0.91

Defence

      

   PDF1.2

At5g44420

-3.33

3.53

2.99

NS

NS

   PDF1.2b

At2g26020

-3.53

3.31

3.00

NS

NS

   PDF1.3

At2g26010

-3.46

3.23

2.80

NS

NS

   PDF1.2c

At5g44430

-3.32

3.23

2.70

NS

NS

   AFP1

At1g75830

-3.04

3.40

2.64

NS

NS

   S-adenosylmethionine-dependent methyltransferase

At3g44870

-1.45

3.13

1.91

NS

NS

   MBP1

At1g52040

-2.53

4.98

0.73

NS

NS

   S-adenosylmethionine-dependent methyltransferase

At3g44860

-1.27

2.60

0.98

NS

-0.86

   arginase

At4g08870

-1.44

4.05

0.94

NS

-0.63

   strictosidine synthase

At3g51450

-1.18

1.70

0.55

-1.01

NS

   EDS5

At4g39030

-0.52

0.87

1.87

1.15

NS

   ASA1

At5g05730

-0.70

0.73

1.08

0.64

0.53

   TAT3

At2g24850

-1.58

3.52

4.20

2.03

NS

   CYP79B2

At4g3995

-0.83

1.17

1.41

1.15

0.47

   PR4

At3g04720

-0.81

1.35

2.32

0.76

1.13

   trypsin inhibitor 1 (ATTI1)

At2g43510

-1.08

3.71

1.74

0.86

1.14

   trypsin inhibitor

At1g73260

-1.65

2.85

1.00

1.44

1.62

   protease inhibitor (LTP)

At5g48490

-0.64

0.79

-0.79

-0.67

-0.98

   HSP17.4-CIII

At1g54050

-0.95

0.81

-0.67

-0.59

-0.55

Transcription factors

      

   WRKY75

At5g13080

-1.82

2.52

3.23

3.18

1.31

   ERF2

At5g47220

-1.13

0.88

2.06

1.02

0.42

   RHL41/ZAT12

At5g59820

-1.39

1.85

3.02

2.26

NS

   HSF6

At5g62020

-0.90

1.05

0.64

0.81

NS

Redox

      

   Atperox P37

At4g08770

-1.46

1.08

1.57

1.36

1.41

   GST22/ATGSTU4

At2g29460

-0.73

0.99

1.87

1.20

1.05

   MDAR4

At5g03630

-0.75

0.62

0.67

0.44

NS

   Atperox P32

At3g32980

-1.49

1.38

-0.82

0.43

NS

   FRO6

At5g49730

-0.84

0.70

-0.76

0.46

-1.25

   copper amine oxidase

At1g31710

-1.56

1.00

-1.17

0.65

NS

Auxin synthesis

      

   ILL4

At1g51760

-0.70

1.71

1.84

NS

NS

   NIT2

At3g44300

-0.82

2.10

1.20

0.95

1.68

cell wall modification

      

   PGIP2

At5g06870

-0.90

2.72

0.63

NS

0.70

   AGP

At1g03820

-0.55

2.81

NS

0.57

1.53

   FLR1

At3g12145

-0.91

2.04

-0.58

0.53

0.60

   invertase/pectin methylesterase inhibitor

At1g62770

-1.30

0.87

-1.01

1.63

1.18

lipid metabolism

      

   esterase/lipase/thioesterase family protein

At2g39420

-0.77

2.29

1.60

NS

NS

unknown

      

   unknown plant specific protein (AR781)

At2g26530

-0.53

1.36

1.31

0.39

NS

  1. The values in the table represent log2 transformed gene expression changes for the following comparisons: aos/wt, change in a gene expression level in aos mutant in comparison to wt; fou2/wt, change in a gene expression level in fou2 mutant in comparison to wt; wtB/wt, change in a gene expression level in wt plants attacked by aphids in comparison to aphid-free wt controls; aos B/aos, change in a gene expression level in aos plants attacked by aphids in comparison to aphid-free aos controls; fou2 B/fou2, change in a gene expression level in fou2 plants attacked by aphids in comparison to aphid-free fou2 controls; NS, not statistically significantly regulated.
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BMC Genomics

ISSN: 1471-2164

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