Skip to main content

Table 5 List of genes found in Cucumis melo mitochondrial genome

From: Determination of the melon chloroplast and mitochondrial genome sequences reveals that the largest reported mitochondrial genome in plants contains a significant amount of DNA having a nuclear origin

RNA genes

     

   tRNAs

trnD-GTCa

trnE-TTCb

trnF-GAA

trnfM-CATb

trnG-GCCb

 

trnH-GTGb

trnH-GTG-cpc

trnI-CATb, d

trnL-CAAb

trnM-CAT

 

trnM-CAT-cpc

trnN-GTT

trnN-GTT-cpc

trnP-TGG

trnQ-TTG

 

trnR-ACG

trnR-ACG-cpc

trnS-GCTb

trnS-TGA

trnS-TGA-cpc

 

trnW-CCAe

trnY-GTA

Ψtrnf

ΨtrnC

 

   rRNAs

rrn26

rrn18

rrn5 a

  

Complex I

(NADH dehydrogenase)

nad1 g, h, i

nad2 i, j

nad3

nad4 k

nad4L g

 

nad5 h, i

nad6

nad7 h

nad9

 

Complex II

(succinate dehydrogenase)

sdh3

sdh 4

   

Complex III

(ubiquinol cytochrome c reductase)

cob

    

Complex IV

(cytochrome c oxidase)

cox1 j

cox2

cox3

  

ATP synthase

atp1

atp4

atp6

atp8

atp9

Other genes

     

   Cytochrome C biogenesis

ccmB

ccmC

ccmFc j

ccmFn

 

   Transport membrane

mttB

    

   Maturase

matR l

    

   Ribosomal proteins

rpl2 j

rpl5

rpl16 m

rps1

rps3 j

 

rps4

rps7

rps10 g, j

rps12

rps13

   Conserved ORFs

ORF1n

ORF2o

ORF3p

ORF4q

 
  1. Pseudogenes are symbolised by ψ
  2. aThree gene copies
  3. bTwo gene copies
  4. cChloroplast origin
  5. dC assumed to be post-transcriptionally modified to lysidine, which pairs with A, not G (see PubMed ID 1698276)
  6. eSeven gene copies
  7. fUndetermined anticodon
  8. gRNA editing creates a codon
  9. hGene contains five exons
  10. iGene undergoes trans-splicing
  11. jGene contains one intron
  12. kGene contains four exons
  13. lStart codon not determined
  14. mAlternative start codon (see PubMed IDs 8193306 and 9327595)
  15. nSimilar to chloroplast ycf2 gene
  16. oSimilar to ORF150 in V. vinifera, ORF159b in Nicotiana, ORF168 in Marchantia and ORF187 in Physcomitrella
  17. pSimilar to amino acid sequence GenBank ID CAA69750.1
  18. qSimilar to 5' fragment of photosystem I P700 apoprotein A1