Whole-genome phylogenies of the family Bacillaceae and expansion of the sigma factor gene family in the Bacillus cereus species-group

Table 2 MEME motifs found in PA sigma factors

PA Locus Tag	1	2	3	4	5	Orthologous BSU locus tag
BAS4194	+	+	+	+	+	BSU25200 (SigA)
BAS0928	+	+	+	+	+	BSU04730 (SigB)
	+	+	+		+	BSU16470 (SigD)
BAS3755	+	+	+	+	+	BSU15320 (SigE)
BAS3983	+	+	+	+	+	BSU23450 (SigF)
BAS3754	+	+	+	+	+	BSU15330 (SigG)
BAS0093	+				+	BSU00980 (SigH)
BAS3231		+			+	BSU13450(SigI)
BAS4236	+	+	+	+	+	BSU25760, 26390 (SigK)
BAS3522						BSU12560 (Xpf)
BAS3823	+	+			+
BAS5102	+	+			+
Bcer98_2607	+	+
BCG9842_0035	+	+	+	+	+
BMB171_P0077	+	+	+		+

A '+' designates the presence of a motif in the PA sigma factor gene at the left. MEME motifs are presented here for a representative (from the BAS genome where available) genome for each of the PA sigma factors detected by the analyses.

ISSN: 1471-2164