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Table 4 PA and ECF sigma factor counts in Bacillaceae genomes

From: Whole-genome phylogenies of the family Bacillaceae and expansion of the sigma factor gene family in the Bacillus cereus species-group

Genome

Locus Tag

PA

ECF

Total

Bacillus cereus species-group:

    

   B. anthracis A0248

BAA

11

16

27

   B. anthracis Ames

BA

11

16

27

   B. anthracis Ames-0581

GBAA

11

16

27

   B. anthracis CDC 684

BAMEG

11

16

27

   B. anthracis Sterne

BAS

11

16

27

   B. cereus biovar anthracis CI

BACI

9

13

22

   B. cereus 03BB102

BCA

9

15

24

   B. cereus AH187

BCAH187

9

17

26

   B. cereus AH820

BCAH820

10

18

28

   B. cereus ATCC-10987

BCE

9

14

23

   B. cereus ATCC14579

BCB

9

10

19

   B. cereus B4264

BCB

9

14

23

   B. cereus G9842

BCG

10

13

23

   B. cereus Q1

BCQ

9

17

26

   B. cereus ZK

BCZK

11

16

27

   B. thuringiensis Al-Hakam

BALH

9

15

24

   B. thuringiensis BMB171

BMB

10

10

20

   B. thuringiensis konkukian

BT

9

17

26

   B. weihenstephanensis KBAB4

KBAB

10

18

28

   B. cereus cytotoxis NVH 391-98

Bcer98

8

3

11

Bacillus subtilis group:

    

   B. amyloliquefaciens FZB42

RBAM

11

6

17

   B. licheniformis ATCC-14580

BL

11

9

20

   B. licheniformis DSM-13

Bli

10

9

19

   B. pumilus SAFR-032

BPUM

11

8

19

   B. subtilis 168

BSU

11

7

18

Bacillus megaterium:

    

   B. megaterium DSM319

BMD

11

8

19

   B. megaterium QM-B1551

BMQ

13

9

22

Geobacillus group:

    

Anoxybacillus flavithermus WK1

Aflv

9

2

11

Geobacillus C56-T3

GC56T3

9

2

11

G. kaustophilus HTA426

GK

9

3

12

G. thermodenitrificans NG80-2

GTNG

11

3

14

Geobacillus WCH70

GWCH70

9

3

12

Geobacillus Y412MC61

GYMC61

9

2

11

Other Bacillaceae:

    

Lysinibacillus sphaericus C3-41

Bsph

9

12

21

Oceanobacillus iheyensis HTE831

OB

11

8

19

Bacillus halodurans group:

    

   B. clausii KSM-K16

ABC

9

5

14

   B. halodurans C-125

BH

10

9

19

   B. pseudofirmus OF4

BpOF4

9

8

17

   B. selenitireducens MLS10

Bsel

5

8

13

Exiguobacterium:

    

Exiguobacterium AT1b

EAT1B

5

5

10

E. sibiricum 255-15

Exig

4

4

8

Paenibacillaceae Outgroups:

    

Brevibacillus brevis NBRC-100599

BBR

11

41

52

Paenibacillus JDR 2

Pjdr2

10

19

29

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BMC Genomics

ISSN: 1471-2164

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