Whole-genome phylogenies of the family Bacillaceae and expansion of the sigma factor gene family in the Bacillus cereus species-group

Table 5 PA sigma factor genes in the Bc species-group compared to B. subtilis

PA Locus tag	BAS	GBAA	BA	BAA	BAMEG	BCAH820	BACl	BT	BALH	BCA	BCZK	BCAH187	BMB	BCQ	BCE	BCG	BCB	BC	KBAB	Bcer98	BSU	Orthologous BSU locus tag
BAS4194	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	BSU25200 (SigA)
BAS0928	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		+	BSU04730 (SigB)
																					+	BSU16470 (SigD)
BAS3755	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	BSU15320 (SigE)
BAS3983	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	BSU23450 (SigF)
BAS3754	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	BSU15330 (SigG)
BAS0093	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	BSU00980 (SigH)
BAS3231	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		+	BSU13450 (SigI)
BAS4236	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	BSU25760, BSU26390 (SigK)
BAS3522	+	+	+	+	+						+								+		+	BSU12560 (Xpf)
BAS3823	+	+	+	+	+
BAS5102	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+
Bcer98_2607																				+
BCG9842_0035																+
BMB171_P0077											+		+

A '+' designates the presence of a PA sigma factor ortholog group. The PA locus tag shown is from B. anthracis strain Sterne, unless this gene was not found in that organism. In those instances another locus tag was chosen as a representative. Genome abbreviations are as in Table 1.

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