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Table 1 Summary of EST sequence analysis for the O.novo-ulmi Yeast LMW library.

From: Functional categorization of unique expressed sequence tags obtained from the yeast-like growth phase of the elm pathogen Ophiostoma novo-ulmi

Parameter

Number

Total ESTs sequenced

5,760

Average length of EST (bp)

498

Readable sequence data

4,386

Sequences matching public databases

2,093

Sequences matching known proteins

1,761

Sequences matching unknown (hypothetical/predicted) proteins

332

Sequences matching known, unique proteins (singletons)

880

Sequences matching unknown proteins in public databases that represent singletons (estimated as 50% of unknown proteins)

166

Total of singletons matching known and unknown unique proteins

1,046

Sequences with no matches in public databases

2,293

Sequences with no matches in public databases (less 20% containing non-authentic sequences)

1,835

Sequences with no matches in public databases that represent singletons (estimated as 50% of unmatched)

917

Total unique sequences from all categories

1,963