Table 2 Summary of the turkey genome physical map and its integration with the chicken genome
Clones used in the physical map construction | 74,013 (11.9 x) |
|---|---|
Contigs assembled | 720 |
Singletons | 18,821 |
Clones contained in the contigs | 55,192 (8.9 x) |
Questionable clones in the contigs | 6,028 (8.1%) |
Consensus bands of the contigs | 575,144 |
Average band number per clone | 53.9 |
Average clone number per contig | 76.7 |
Physical length contribution per clone | 30.3 kb |
Average contig size | 2,317 kb |
Largest contig size | 26.1 Mb (containing 995 clones) |
BES contained in the physical map | 28,385 |
Total physical length of the physical map | 1,668 Mb |
DNA markers/genes in the physical map | 2,551 |
DNA markers/genes aligned to the chicken genome | 2,551 (15,683 BAC assignments) |
BES aligned to the chicken genome | 28,385 (18,821 paired-ends) |
Contigs assigned to the chicken chromosomes | 516 (1,609 Mb) |