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Table 4 Frequency of di- and trinucleotide EST-SSR repeat motifs in sesame

From: Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers

Repeat motif Repeat numbers Total %
  5 6 7 8 9 10 > 10   
AC/GT - 349 247 210 148 51 133 1,138 16.07
AG/CT - 786 581 512 396 302 702 3,279 46.29
AT/AT - 316 172 131 68 24 35 746 10.53
CG/CG - 1 1 1    0 3 0.04
AAC/GTT 32 20 10   1   0 63 0.89
AAG/CTT 237 111 50 23 19 1 0 441 6.23
AAT/ATT 77 26 6 2 5   0 116 1.64
ACC/GGT 137 55 23 13 4   1 233 3.29
ACG/CTG 102 35 14 8 3   0 162 2.29
ACT/ATG 104 46 20 13 6 1 2 192 2.71
AGC/CGT 79 33 12 8 5   0 137 1.93
AGG/CCT 135 56 30 12 5 2 0 240 3.39
AGT/ATC 146 40 21 11 3   2 223 3.15
CCG/CGG 81 21 8     0 110 1.55
Total 1,130 1,895 1,195 944 663 381 875   
% 15.95 26.75 16.87 13.33 9.36 5.38 12.35