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Table 4 Exonic and intronic RNA-seq read number comparison between E18 and P7 for exon guidance related genes.

From: Comparative analysis of neural transcriptomes and functional implication of unannotated intronic expression

Gene Name Number of detected reads in E18 Number of detected reads in P7
  From Exon From Intron From Exon From Intron
Slit3 43 1012 96 827
Robo2 2123 4900 1415 796
Robo1 1569 1872 425 362
Nrp1 991 1688 533 416
Nrcam 775 1150 1434 730
Klf7 1032 826 1088 328
Gli3 295 133 83 51
Ephb2 697 845 548 456
Ephb1 2006 1773 834 435
Dcc 1294 6509 281 1246
Read Ratio (Intron/Exon) 3.860 1.802
Intronic Read Ratio (E18/P7) 3.67
Exonic Read Ratio
(E18/P7)
1.61
Myc 358 13 229 8
Actb 8847 144 8236 503
Tuba1a 4029 63 3724 214
Read Ratio (Intron/Exon) 0.023 0.051
Intronic Read Ratio (E18/P7) 0.30
Exonic Read Ratio
(E18/P7)
1.09