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Table 2 Inter and Intra-racial polymorphisms for 4 putative CRN observed on four P.halstedii races (100, 304, 703, and 710)

From: Transcriptomic analysis of the interaction between Helianthus annuus and its obligate parasite Plasmopara halstedii shows single nucleotide polymorphisms in CRN sequences

Cluster Polymorphism site position SNP allele Race 100 Race 304 Race 703 Race 710 Khi-2
PhCRN_01 1323 A 3 6 27 8 20.88***
PhCRN_03 1989 G 6 15 6 16 98.81***
   T 1 17 0 19  
  1989 C 6 22 150 11 98.81***
  2009 A 6 25 100 25 3.49
  2009 T 1 4 12 0 3.49
  2012 T 7 16 100 5 24.91***
  2012 C 0 12 23 11 24.91***
  649 -- 8 15 16 10 18.15***
PhCRN_04 1122 TA 3 6 2 21 2.21
   A 10 18 20 16  
  1122 G 13 25 16 24 2.21
  2104 A 2 7 2 12 7.82*
PhCRN_05 2123 C 8 12 13 10 9.22*
   A 3 12 2 13  
  2123 G 4 8 12 8 9.22*
  2133 TT 5 7 9 5  
  2133 CC 2 12 4 12 7.15
  823 T 11 24 0 0 56.00***
   G 0 0 11 10  
  1. Frequencies for each allele for each race are indicated. The khi-2 calculations refer to H0: similar frequencies between races at each position (df = 3, *: significative at 5%; **: significative at 1%; ***: significative at 0.1%).