|
Cluster
|
Polymorphism site position
|
SNP allele
|
Race 100
|
Race 304
|
Race 703
|
Race 710
|
Khi-2
|
|---|
|
PhCRN_01
|
1323
|
A
|
3
|
6
|
27
|
8
|
20.88***
|
|
PhCRN_03
|
1989
|
G
|
6
|
15
|
6
|
16
|
98.81***
|
| | |
T
|
1
|
17
|
0
|
19
| |
| |
1989
|
C
|
6
|
22
|
150
|
11
|
98.81***
|
| |
2009
|
A
|
6
|
25
|
100
|
25
|
3.49
|
| |
2009
|
T
|
1
|
4
|
12
|
0
|
3.49
|
| |
2012
|
T
|
7
|
16
|
100
|
5
|
24.91***
|
| |
2012
|
C
|
0
|
12
|
23
|
11
|
24.91***
|
| |
649
|
--
|
8
|
15
|
16
|
10
|
18.15***
|
|
PhCRN_04
|
1122
|
TA
|
3
|
6
|
2
|
21
|
2.21
|
| | |
A
|
10
|
18
|
20
|
16
| |
| |
1122
|
G
|
13
|
25
|
16
|
24
|
2.21
|
| |
2104
|
A
|
2
|
7
|
2
|
12
|
7.82*
|
|
PhCRN_05
|
2123
|
C
|
8
|
12
|
13
|
10
|
9.22*
|
| | |
A
|
3
|
12
|
2
|
13
| |
| |
2123
|
G
|
4
|
8
|
12
|
8
|
9.22*
|
| |
2133
|
TT
|
5
|
7
|
9
|
5
| |
| |
2133
|
CC
|
2
|
12
|
4
|
12
|
7.15
|
| |
823
|
T
|
11
|
24
|
0
|
0
|
56.00***
|
| | |
G
|
0
|
0
|
11
|
10
| |
- Frequencies for each allele for each race are indicated. The khi-2 calculations refer to H0: similar frequencies between races at each position (df = 3, *: significative at 5%; **: significative at 1%; ***: significative at 0.1%).
