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Table 2 Number of Gene Models Binned by Median Sequencing Depth Cut-off

From: Functional annotation of the transcriptome of Sorghum bicolor in response to osmotic stress and abscisic acid

  0x SDa ≤ 1x SD 1x < SD ≤ 2x 2x < SD ≤ 5x 5x < SD ≤ 10x 10x < SD ≤ 50x > 50x SD
ABA-Treated Roots 10004 5136 2026 3599 3816 7542 2022
NaOH-Treated Roots 9943 5158 2110 3625 3694 7547 2068
PEG-Treated Roots 9674 5154 1987 3620 3792 7753 2165
H2O-Treated Roots 9925 5189 2115 3627 3673 7558 2058
ABA-Treated Shoots 10639 5695 2072 3641 3784 6424 1890
NaOH-Treated Shoots 10462 5642 2053 3553 3736 6625 2074
PEG-Treated Shoots 10033 5465 2058 3533 3776 7249 2031
H2O-Treated Shoots 10794 5800 2060 3647 3804 6251 1789
  1. aSD denotes sequencing depth calculated as the total number of bases mapped to a gene (exons only) divided by total gene (exon) length.