Table 2 Summary of reference assembly of expressed short reads of channel catfish and blue catfish
Catfish species | No. of reads used for assembly | No. of reads assembled | % sequences assembled | No. of contigs | Average contig length (bp) | Average contig size* | Average coverage# |
|---|---|---|---|---|---|---|---|
Channel | 218.8 × 106 | 152.6 × 106 | 69.8% | 103,650 | 670 | 1,473 | 137.4 |
Blue | 274.6 × 106 | 183.8 × 106 | 66.7% | 104,475 | 775 | 1,760 | 164.2 |