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Figure 5 | BMC Genomics

Figure 5

From: Tandemly repeated DNA families in the mouse genome

Figure 5

TRPC-21A-MM HOR structure. A: The similarity dot plot of TRPC-21A-MM array N50 (in Additional file 1, Table S3); a window size is 13 bp, sequence similarity is shown in gray scale. Units are shown as large arrows with length indicated. Smaller arrows indicate HOR subunits; colors indicate subunits variants. B; The structure of 2017 bp units, two subunits with corresponding size are indicated. C: 21 bp is the basic unit for TRPC-21A-MM as it is visible on dot plot at high magnification. Number of 21 monomers is indicated. Blue arrow represents one unit. D: The black and white dot plot with a window size of 51 bp and minimum 80% identity.

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