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Table 1 The most common haplotypes at the region 32.5 - 34.4 Mbp on chromosome 12 and their frequencies among cases and controls.

From: An exonic insertion within Tex14 gene causes spermatogenic arrest in pigs

   Haplotypes
SNP Position 1 2 3 4 5 6 7 8
DIAS0000466 32486728 A A G A A A A A
DRGA0011732 32552621 C C A C C C C C
MARC0040388 32564534 G A G G G G A A
ALGA0066208 32594630 G A G A A A A A
ALGA0066210 32620047 C A A A A A A A
ASGA0054360 32676377 A G G G G G A G
ALGA0066214 32706622 A C C C C A A A
ASGA0054362 32729466 A A A A A G G G
MARC0016326 32762378 A G G G G A A A
ALGA0066216 32843547 A G G G G G G G
ALGA0116573 32936852 A A G A G A A A
ALGA0066218 33179967 G G A G A G G G
ALGA0066217 33236507 G A G G G A G A
ASGA0097668 33738117 A A A G A G A A
ASGA0103400 33776732 A A A A A G A A
ALGA0066221 33825748 A G A A A A G A
ALGA0066222 33852536 G A A G G A A A
MARC0039239 33887438 C C A C C A C C
DRGA0011741 33924664 C A A C A A A A
DRGA0011742 33965584 A A A A A A A G
INRA0038984 34016194 A C A C A C C A
ALGA0066230 34081571 A G G G A G G G
H3GA0034268 34115708 C C A A C A C A
ALGA0066234 34129776 G A G G A G A G
MARC0084960 34150307 G G A A G A G A
H3GA0034269 34183841 G A A G G A A A
ASGA0054380 34233636 G G A A A G G G
H3GA0034274 34343301 C C C C A C C A
ALGA0066247 34362626 G G G G G A G A
Cases   18 0 0 0 0 0 0 0
Controls   25 146 129 87 78 49 47 47
  1. Haplotype 1 is the longest haplotype that is shared by all cases in this chromosome region. The SNPs that fulfil recessive mode of inheritance in the large data set are marked in bold face.