Refinement of Bos taurus sequence assembly based on BAC-FISH experiments

BMC Genomics

Table 2 Bioinformatic and experimental mapping of 50 largest Btau ChrUns

ChrUn	BAC code	UMD	FISH	ChrUn	BAC code	UMD	FISH
004.1	U1	14	14	004.29	U29	1	1
004.2	U2	16	16	004.30	U30	X	Xq
004.3	U3a	2	2	004.31	U31	X	Xq
	U3b	16	16	004.32	U32	X	Xq
004.4	U4	12	12	004.33	U33	X	Xq
004.5	U5	12	12	004.34	U34	X	Xq
		21 *		004.35	U35a	2	2
		20 *			U35b	4	MS
004.6	U6	X	X			22
004.7	U7	7	7			26
004.8	U8	13	13			28
004.9	U9	X	Xq, Y	004.36	U36	19	19
004.10	U10a	X	Xq	004.37	U37	7	7
	U10b	X	Xq	004.38	U38	29	29, MS
004.11	U11a	21	21	004.39	U39a	15	23
	U11b	1	1		U39b	23	MS
004.12	U12	X	Xq			24
004.13	U13	X	Xp			21
004.14	U14	6	6			14
004.15	U15	X	Xp			22
004.16	U16	X	Xp			20
004.17	U17	X	Xq			22
004.18	U18	18	18	004.40	U40	3	3
004.19	U19	X	Xq	004.41	U41	X	Xp
004.20	U20	X	Xq	004.42	U42	U	8
004.21	U21	X	Xq	004.43	U43	12	12
004.22	U22a	9	9	004.44	U44	X	Xq, Y
	U22b	8	8	004.45	U45	21	21
004.23	U23	12	12	004.46	U46	5	5
004.24	U24	21	21	004.47	U47	10	7
004.25	U25	3	3	004.48	U48	U	8
004.26	U26	15	15	004.49	U49	X	Xp
004.27	U27	12	12	004.50	U50	X	Xp
004.28	U28	15	15

BACs mapping within the 50 largest Btau ChrUns were hybridized in metaphase nuclei. Cases where the bioinformatic and biological position were discordant are in bold.

ISSN: 1471-2164