Skip to main content

Advertisement

Table 2 Summary of the SNP to gene assignment

From: Exome localization of complex disease association signals

Protein-coding genes on chromosome 1-22 20,919
Protein-coding genes after SNP to gene assignment 17,058
Protein-coding genes with SNP in transcribed regions 13,783
Protein-coding genes with SNP in coding exon 2,887
SNPs on chromosome 1-22 488,665
SNPs in transcribed regions 194,831
SNPs 100 kb upstream or downstream of transcribed region 151,984
SNPs in coding exons 3,878
average gene length (whole transcript ± 1 s.d.) 53,334 ± 112,931
average gene length of genes with SNP in transcribed region (whole transcript ± 1 s.d.) 75,928 ± 132,938
average gene length (coding exons only ± 1 s.d.) 1,747 ± 1,889
average gene length of genes with SNP in exon (coding exons only ± 1 s.d.) 2,826 ± 3,339