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Table 5 Comparison of physical interactions and predicted physical interologs datasets

From: Comparative analysis and assessment of M. tuberculosis H37Rv protein-protein interaction datasets

Organism Benchmark dataset Testing PPI dataset Jaccard coefficient Precision Recall Overlapping PPIs No.
M. tuberculosis H37Rv H37Rv pull-down interologs H37Rv physical interologs 0.021 0.205 0.023 40
M. tuberculosis H37Rv H37Rv B2H PPI H37Rv physical interologs 0.005 0.005 0.050 2
S. aureus MRSA252 MRSA252 Pull Down PPI dataset MRSA252 physical interologs 0.019 0.126 0.022 23
  1. Summary of the comparison results between physical interactions and predicted interologs datasets. “H37Rv physical interologs dataset” consists of interologs transferred from “selected IntAct prokaryotic physical interactions dataset” to M. tuberculosis H37Rv; “MRSA252 physical interologs dataset” consists of interologs transferred from “selected IntAct prokaryotic physical interactions dataset” to S. aureus MRSA252; “H37Rv pull-down interologs dataset” consists of interologs transferred from “S. aureus MRSA252 high-throughput pull-down PPI dataset” to M. tuberculosis H37Rv.