Table 6 Percentage of PPIs in representative two-hybrid PPI datasets having coherent informative GO terms
From: Comparative analysis and assessment of M. tuberculosis H37Rv protein-protein interaction datasets
CC | BP | MF | GO | |
|---|---|---|---|---|
S. cerevisiae Y2H PPI | 49.74% | 38.43% | 35.90% | 40.58% |
S. cerevisiae random PPI | 5.03% | 3.70% | 7.72% | 7.08% |
Info GO ratio of S. cerevisiae (Y2H PPI/ random) | 9.88 | 10.38 | 4.65 | 5.73 |
Info GO term No. | 57 | 173 | 78 | 365 |
C. jejuni Y2H PPI | 47.37% | 17.01% | 16.27% | 17.91% |
C. jejuni random PPI | 35.61% | 11.04% | 12.91% | 13.97% |
Info GO ratio of C. jejuni (Y2H PPI / random) | 1.33 | 1.54 | 1.26 | 1.28 |
Info GO term No. | 3 | 26 | 22 | 51 |
Synechocystis Y2H PPI | 80.77% | 26.16% | 25.30% | 29.47% |
Synechocystis random PPI | 44.94% | 6.89% | 8.59% | 9.73% |
Info GO ratio of Synechocystis (Y2H PPI / random) | 1.80 | 3.79 | 2.95 | 3.03 |
Info GO term No. | 3 | 30 | 30 | 63 |
M. tuberculosis B2H PPI | 38.46% | 14.36% | 9.57% | 13.83% |
M. tuberculosis random PPI | 38.30% | 11.35% | 8.35% | 11.51% |
Info GO ratio of M. tuberculosis (B2H PPI / random) | 1.00 | 1.26 | 1.15 | 1.20 |
Info GO term No. | 3 | 32 | 32 | 67 |