|
Metagenome
|
Total number of sequences
|
Sequence length range
|
Approximate estimate of time (in minutes) need for binning
|
Reference (s)
|
|---|
| | | |
INDUS
|
TACOA
|
SOrt-ITEMS
|
MEGAN
|
SPHINX
| |
|---|
|
Global Ocean Survey
|
7521215
|
~800bp
|
10530 (~ 7 days)
|
129580 (~90 days)
|
319330 (~221 days)
|
287095 (199 days)
|
15901 (11 days)
|
[18–20]
|
|
Lean and obese mouse metagenome
|
1744283
|
~100bp
|
1544 (~ 1 day)
|
8771 (6 days)
|
52097 (36 days)
|
48390 (33 days)
|
2093 (1.5 days)
|
[21]
|
|
Malnourished child metagenome
|
1496170
|
~250bp - 400bp
|
1795 (1.2 days)
|
17526 (12 days)
|
51297 (~36 days)
|
44885 (~31 days)
|
2308 (1.6 days)
|
[22]
|
|
Acid Mine Drainage
|
180713
|
~800bp
|
252
|
3113
|
7672
|
6898
|
382
|
[23]
|
- Approximate time (in minutes) estimated to be taken by INDUS, TACOA, SOrt-ITEMS, MEGAN and SPHINX for binning some of the real metagenomic data sets (on a desktop with an Intel Xeon-Quad core processor and 4 GB RAM)
