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Table 9 Number of positive, out of frame upstream and downstream negative sequences (OFN) with a window size of -10+30. Compares the two approaches: with and without the inclusion of the acquired knowledge method (InAKnow).

From: Improvement in the prediction of the translation initiation site through balancing methods, inclusion of acquired knowledge and addition of features to sequences of mRNA

  Without InAKnow With InAKnow
  Positives Up. Negatives Down. Negatives Positives Up. Negatives Down. Negatives
Arabidopsis thaliana 24339 17267 570619 68572 17267 526386
Caenorhabditis elegans 8763 6188 443052 57989 6188 393826
Drosophila melanogaster 19782 31269 404623 76907 31269 347498
Homo sapiens 15845 17495 336111 62212 17495 289744
Nasonia vitripennis 31 19 315 181 19 165
  1. Total quantity of mRNA for organisms Arabidopsis thaliana, Caenorhabditis elegans, Drosophila melanogaster, Homo sapiens and Nasonia vitripennis are respectively 33200, 23894, 22303, 16264 and 35. Download in 05/03/2011.