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Table 2 The 20 most abundant transcripts in P. notoginseng root

From: Analysis of the transcriptome of Panax notoginseng root uncovers putative triterpene saponin-biosynthetic genes and genetic markers

Rank Contig Gene ID Gene name No. of reads
1 contig14005 No hit   3,358
2 contig13784 sp|Q9SVG4| Reticuline oxidase -like protein 3,043
3 contig13829 gb|AAX40471.1| P. ginseng-specific abundant protein 3 2,114
4 contig13823 gb|AY829463.1| P. ginseng-specific abundant protein 3 1,949
5 contig00208 sp|P30924| 1,4-alpha-glucan- branching enzyme 1,748
6 contig00313 dbj|BAF98277.1| Acetyl-CoA acetyltransferase 1,301
7 contig00270 gb|EEF30081.1| Heat shock protein, putative 1,129
8 contig00110 dbj|BAB68539.1| (S)-reticuline oxidase-like protein 1,048
9 contig13785 dbj|BAF33291.1| P. ginseng dammarenediol-II synthase 1,018
10 contig13417 gb|AAO38031.1| Delta12-fatty acid acetylenase 1,009
11 contig00111 gb|ACJ24907.2| P. ginseng squalene epoxidase 865
12 contig00323 No hit   778
13 contig13999 gb|DQ384527.1| P. ginseng clone PG6L-4 747
14 contig00310 gb|EEF49052.1| Heat shock protein, putative 742
15 contig00282 gb|AAR17080.1| Heat shock protein 70-3 711
16 contig00123 sp|P49035| Sucrose synthase isoform 1 616
17 contig13552 gb|ABB29477.1| Tonoplast intrinsic protein 538
18 contig00095 sp|Q07511| Formate dehydrogenase 537
19 contig00665 ref|YP_588403.1| Hypothetical protein 527
20 contig13555 gb|EEF34649.1| Heat shock protein 511