From: Variation in genomic islands contribute to genome plasticity in Cupriavidus metallidurans
Gene cluster in CH34c, d | AS39 | AS167 | AS168 | KT01 | KT02 | KT21 | SV661 | CH42 | CH79 | 31A | NE12 | NA1 | NA2 | NA4 | 43015 | 45957 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
cdfX, pbr R 2 cadA pbrC 2 , | Â | Â | Â | Â | Â | Â | Â | XAC 2 | XAC 2 | XAC 2 | Â | XAC 2 | XAC 2 | XAC 2 | XAC 2 | XAC 2 |
pbr R 3 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
pbrU b |U a T R pbrABCD | Â | Â | Â | R | Â | Â | Â | Â | UbUa | Â | Â | Â | Â | Â | UbRAD | UbRABCD |
mer R TPA'A″ |  |  | R | R |  |  |  | R | R | R |  | RPA | RPA | R | R | RA |
mer R TPADE urf-2 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
mer R TPADE urf-2 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
mer R T ΔP |  |  |  |  |  |  |  | RT ΔP | RT ΔP | RT ΔP | RT ΔP | RT ΔP | RT ΔP | RT ΔP | RT ΔP | RT ΔP |
ChrBAF | Â | Â | F | F | Â | Â | Â | Â | BF | Â | BF | BF | BF | Â | Â | Â |
chrIBACE F ONPYZ | Â | Â | Â | Â | Â | Â | Â | IBACEOY | IBACEFOY | Â | Z | Â | BO | Â | O | Â |
cusDCBAF | Â | Â | D | D | Â | Â | D | DB | D | D | Â | Â | D | Â | Â | D |
silDCBA cus ΔF |  |  |  | C |  |  |  |  |  |  |  |  |  |  | F | F |
cop SR ABCD | S | S | SC | SC | C | C | SC | SC | C | SC | C | C | C | Â | SC | C |
copV-W(*) | Â | Â | IJF | KCIJFOH | Â | Â | FH | Â | Â | Â | Â | Â | Â | Â | Â | Â |
czcL RS ubiG czcB a |B b CI | Â | Â | I | I | Â | Â | Â | Â | I | Â | Â | Â | Â | Â | I | I |
zntA | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
czcMNICBAD RS EJ ompP | Â | Â | B | BS | Â | Â | Â | Â | ompP | Â | Â | S | S ompP | S | Â | Â |
czcP | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | ompP | Â | Â | Â | Â |
nimBA a |A b C | C | C | BC | BC | C | Â | C | C | BC | BC | Â | Â | Â | Â | C | C |
cnr YXH CBAT | HC | HC | YHC | HC | HC | C | HC | YXHCBA | YXHCBAT | C | HC | HC | YXHCA | C | C | Â |
nccCB″B'A nreB |  |  | CB' | CB |  |  | B' | CB"B'A |  |  | B" | B" |  |  | CB' | CB"B'A |
arsPHC 1 BC 2 IRM | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
cupRAC | Â | Â | Â | R | Â | Â | Â | Â | R | Â | Â | Â | Â | Â | Â | Â |
agrCBA RS | Â | S | S | Â | Â | Â | Â | Â | Â | Â | Â | B | Â | Â | Â | Â |
hmz RS hmzB ΔA | RB | RB | RBA | RBA | R | R | B | RSBΔA | RSBΔA | RSBΔA | R | R | B | RSBΔA | R | R |
hmvCB ΔA |  |  |  | CB |  |  |  |  | C |  | BA | BA | BA | BA |  | A |
zniABC SR zneP RS CAB (#) | C i | C i | C i | C i | C i | C i | C i | C i | C i | C i | C i | C i C e | C i C e | C i | Â | Â |
hmyCB|hmyA | Â | Â | C | C | Â | Â | Â | Â | Â | Â | A | A | Â | Â | Â | Â |