Table 2 Genes selected for analysis with respect to cellulase expression and deletion strains
Strain | locus ID | description/function | topic/selection criteria | potential contribution to cellulolytic efficiency in |
|---|---|---|---|---|
FGSC12595 | NCU00365 | hypothetical protein, repressed by CPC-1 | amino acid metabolism | Â |
FGSC14540 | NCU03935 | homoserine dehydrogenase | amino acid metabolism | Â |
FGSC21460 | NCU04050 | cpc-1 encoding cross pathway control protein | amino acid metabolism | Δwc-1 and Δwc-2 |
FGSC17355 | NCU04482 | hypothetical protein, upregulated by aa starvation | amino acid metabolism | Δwc-1 and Δwc-2 |
FGSC19959 | NCU06724 | glutamine synthetase | amino acid metabolism | Â |
FGSC14944 | NCU02500 | ccg-4 alpha type peptide pheromone | consistent regulation | Â |
FGSC18933 | NCU06687 | glycogen synthase | consistent regulation/glycogen metabolism | Â |
FGSC20155 | NCU07027 | glycogen phosphorylase | consistent regulation/glycogen metabolism | Â |
FGSC17911 | NCU08226 | glycosyl transferase family 2 | consistent regulation/glycogen metabolism | Δwc-2 |
FGSC11557 | NCU00104 | heat shock protein, HSP98-like | differential regulation by WC-1 and WC-2 | Â |
FGSC17055 | NCU00716 | non-anchored cell wall protein, ncw-5 | differential regulation by WC-1 and WC-2 | Δvvd and Δwc-2 |
FGSC11568 | NCU07232 | heat shock protein 30, light responsive | differential regulation by WC-1 and WC-2 | Â |
FGSC11202 | NCU00355 | catalase-3 | fenton chemistry/oxidative depolymerization | Δvvd |
FGSC16398 | NCU00829 | ferric reductase | fenton chemistry/oxidative depolymerization | Δvvd |
FGSC13139 | NCU01873 | cellobiose dehydrogenase | fenton chemistry/oxidative depolymerization | Â |
FGSC16325 | NCU02948 | quinone oxidoreductase, type IV; light responsive; non-anchored cell wall protein, ncw-4 | fenton chemistry/oxidative depolymerization | Â |
FGSC11223 | NCU03013 | copper/zinc super oxide dismutase (SOD); anchored cell wall protein, acw-10 | fenton chemistry/oxidative depolymerization | Â |
FGSC11351 | NCU05113 | multicopper oxidase/laccase precursor | fenton chemistry/oxidative depolymerization | Δwc-2 |
FGSC13601 | NCU05595 | cellobiose dehydrogenase | fenton chemistry/oxidative depolymerization | Â |
FGSC13819 | NCU05923 | cellobiose dehydrogenase | fenton chemistry/oxidative depolymerization | Â |
FGSC20315 | NCU08432 | cellobiose dehydrogenase | fenton chemistry/oxidative depolymerization | Â |
FGSC10372 | NCU08807 | carbon catabolite repressor cre-1 | target of the white collar complex | Â |
FGSC16190 | NCU02240 | endoglucanase II, glycosyl hydrolase family 61 | up-regulation in Δvvd |  |
FGSC16218 | NCU02344 | cellulose binding protein CEL1, glycoside hydrolase family 61 | up-regulation in Δvvd |  |
FGSC16318 | NCU02663 | L-lysine 2,3 aminomutase; radical SAM superfamily | up-regulation in Δvvd |  |
FGSC16228 | NCU02855 | endo 1,2 beta xylanase A; glycosyl hydrolase family 11 | up-regulation in Δvvd | Δvvd |
FGSC16379 | NCU03753 | grg-1 encoding glucose repressible protein; clock controlled protein CCG-1 | up-regulation in Δvvd |  |
FGSC13439 | NCU05159 | acetylxylan esterase, contains fungal cellulose binding domain | up-regulation in Δvvd |  |
FGSC18946 | NCU07787 | clock controlled gene ccg-14, probable Snodprot1, ceratoplatanin like | up-regulation in Δvvd |  |
FGSC19600 | NCU07898 | endoglucanase IV, glycosyl hydrolase family 61 | up-regulation in Δvvd |  |
FGSC18480 | NCU10045 | pectin esterase | up-regulation in Δvvd |  |
FGSC13753 | NCU08192 | fungal hydrophobin, magnaporin related | up-regulation in Δwc-1 and Δwc-2 |  |
FGSC13811 | NCU05789 | endo 1,3 (4) beta glucanase, glycosyl hydrolase family 16 | up-regulation in Δwc-2 |  |