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Table 8 Real-time qPCR primers

From: Gene expression in Atlantic salmon skin in response to infection with the parasitic copepod Lepeophtheirus salmonis, cortisol implant, and their combination

Gene name and symbol

GenBank

Primers

11-beta-hydroxysteroid dehydrogenase (HSD11B)

EG835598

ATTTCCCTCTGAGGCTCTCA1

  

CTGGACAAACAGTCTCTGGA

Barrier-to-autointegration factor (BANF1)

BT049316

ACAGACCCCTCATCATCCTG

  

CGGTGCTTTTGAGAAGTGGT

Enolase 3 (ENOA)

GE620476

TGTAACTGCCTGCTCCTCAA

  

TTGATGGACTCTGTGACGGA

H-2 class II histocompatibility antigen gamma (HG2A)

BT049560

GACATCTACCCAAGGGCCAA

  

AGGATGGAATACTCGCTGGC

Interleukin 17D (IL17D)

EG869657

CTGAATGCGTTCCACCACAC

  

GGTGAGATTCTTCCGCTCCA

Lumican (LUM)

BT045162

ACTGCCATGTACTGTGACTCCC

  

CCTCGATCAGGTTGTTCTGC

Lymphocyte G0/G1 switch protein 2 (G0S2)

EG834405

TCCATTCGCTAAGGAGATGC

  

TAGAACCCAGCAGGTACACCTT

Matrix metalloproteinase-13 (MMP13)

BT046016

TGATGTCCAAGTCAGCCGCTTC

  

TGGTCTGCCACTTGCGATTGTC

Matrix metalloproteinase-9 (MMP9)

BT045896

GCTACCACCAGCGACTTTGA

  

GCAACCAGGAACAGACTGTAGC

Mimecan/osteoglycin (OGN)

BT045896

AACCAGGAATCAACACTCCGAC

  

GGAACACCATGCTGGAGTCATA

Myosin regulatory light chain 2 (MLC2)

AJ557152

GCTGATCCCGAGGATGTCAT

  

GGAACACCATGCTGGAGTCATA

Protein-lysine 6-oxidase (LYOX)

BT045452

GGAAGCCAACAAACCCTCTGAT

  

CCTGTGCGAATAGATGAGGGAA

SPARC precursor (SPRL1)

BT045906

GCAAGAAGGGAAAGGTGTGTGA

  

TAGATGCAGTTTGTGGCCCTTC

  1. 1Efficiencies of all primer pairs were in the range from 1.85 to 2.00