From: Gene fragmentation in bacterial draft genomes: extent, consequences and mitigation
Uncorrected | ||||
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 |  | Pfama | COGa | KEGGa |
Including PP-C42 | % Partial ORFs fragments vs. % all ORFs annotated | r = -0.854 P < 0.001 | r = -0.551 P = 0.012 | r = 0.586 P = 0.007 |
 | Mean ORF length vs. % all ORFs annotated | r = 0.785 P < 0.001 | r = 0.526 P = 0.017 | r = -0.403 P = 0.078 |
Excluding PP-C42 | % Partial ORF fragments vs. % all ORFs annotated | r = -0.421 P = 0.073 | r = -0.019 P = 0.939 | r = 0.415 P = 0.078 |
 | Mean ORF length vs. % all ORFs annotated | r = 0.406 P = 0.084 | r = 0.157 P = 0.520 | r = -0.016 P = 0.949 |
Corrected using matched partial ORF sets | ||||
 |  | Pfam | COG | KEGG |
Including PP-C42 | % Partial ORFs fragments vs. % all ORFs annotated | r = -0.861 P < 0.001 | r = -0.595 P = 0.007 | r = 0.469 P = 0.050 |
 | Mean ORF length vs. % all ORFs annotated | r = 0.787 P < 0.001 | r = 0.563 P = 0.012 | r = -0.284 P = 0.253 |
Excluding PP-C42 | % Partial ORF fragments vs. % all ORFs annotated | r = -0.338 P = 0.170 | r = 0.027 P = 0.915 | r = 0.350 P = 0.168 |
 | Mean ORF length vs. % all ORFs annotated | r = 0.378 P = 0.122 | r = 0.155 P = 0.538 | r = 0.052 P = 0.842 |