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Table 1 Transcription factors association with gene data set

From: The dependence of expression of NF-κB-dependent genes: statistics and evolutionary conservation of control sequences in the promoter and in the 3′ UTR

Rank Matrix Transcription factor Association score p-value
1 NFKAPPAB65_01 Rela 15.083 0.00
2 NFKB_Q6_01 Nf-κb1, Nf-κb2 13.488 0.00
3 NFKAPPAB_01 Rela 13.336 0.00
4 CREL_01 C-rel 12.883 0.00
5 NFKB_Q6 N/A 11.200 0.00
6 NFKB_C N/A 9.671 0.00
7 NFKAPPAB50_01 N/A 7.199 0.00
8 CDPCR1_01 Cutl1 5.367 8.30 × 10-5
9 CDPCR3HD_01 Cutl1 5.265 1.03 × 10-4
10 PAX2_01 Pax-2 , Pax-2a 4.845 2.66 × 10-4
  1. PASTAA results for TFs associated with input set of genes ranked by p-values. Values were obtained for human sequences and human-mouse conserved sequence blocks. PASTAA settings: promoter sequence length closest to that considered in our study was 400 bp upstream TSS, affinity level: maximum affinity across promoter range.