Table 1 Description of the datasets used for the analysis
Short namea | Description | Biological source | Reference | Data IDb | Chipc | Cluster |
|---|---|---|---|---|---|---|
+serum.0-2 h | serum starvation release | Mus musculus | PMID: 17405863 | GSE7363 | MG_U74Av2 | extracellular signalling |
+EPO.0-2 h | erythroid EPO deprivation release | Mus musculus | PMID: 18625885 | E-MEXP-1689 | MG_U74Av2 |  |
-LIF.0-5d | stem cell differentiation through LIF removal | Mus musculus | PMID: 18462695 | GSE9563 | Mouse430_2 | Â |
+LPS.0-1 h | macrophage LPS treatment (1 h) | Mus musculus | PMID: 18230670 | GSE4288 | Mouse430_2 |  |
+LPS.0-2 h | macrophage LPS treatment (2 h) | Mus musculus | PMID: 18230670 | GSE4288 | Mouse430_2 |  |
+LPS.0-4 h | macrophage LPS treatment (4 h) | Mus musculus | PMID: 18230670 | GSE4288 | Mouse430_2 |  |
+diff.WT.hepa | differentiation of WT hepatocytes | Homo sapiens | PMID: 18221535 | E-MEXP-958 | HG-U133A | differentiation |
+diff.mTOR.hepa | differentiation of mTOR activated hepatocytes | Homo sapiens | PMID: 17483347 | E-MEXP-958 | HG-U133A | Â |
+diff.testis.P17-P22 | testis differentiation (5d) | Mus musculus | PMID: 16682651 | GSE4711 | MOE430A | Â |
+diff.testis.P17-P70 | testis differentiation (53d) | Mus musculus | PMID: 16682651 | GSE4711 | MOE430A | Â |
+diff.testis.P22-P70 | testis differentiation (48d) | Mus musculus | PMID: 16682651 | GSE4711 | MOE430A | Â |
+diff.lung.E19-E22 | lung differentiation (3d) | Rattus norvegicus | PMID: 18952566 | GSE12153 | Rat230_2 | Â |
+diff.lung.E19-P1 | lung differentiation (embrionic vs postnatal) | Rattus norvegicus | PMID: 18952566 | GSE12153 | Rat230_2 | Â |
+diff.lung.E22-P1 | lung differentiation (embrionic vs postnatal) | Rattus norvegicus | PMID: 18952566 | GSE12153 | Rat230_2 | Â |
+eIF4E | eIF4E overexpression | Homo sapiens | PMID: 17638893 | GSE6043 | HG-U133_Plus_2 | translational machinery alteration |
-eIF4GI | eIF4GI depletion | Homo sapiens | PMID: 18426977 | GSE11011 | HG-U133A_2 | Â |
+v-Ki-ras | v-Ki-ras transformation | Homo sapiens | PMID: 16446406 | E-MEXP-461 | HG_U95Av2 | Â |
+mTOR.no-diff | mTOR activation of proliferative hepatocytes | Homo sapiens | PMID: 17483347 | E-MEXP-958 | HG-U133A | Â |
+mTOR.diff | mTOR activation of differentiated hepatocytes | Homo sapiens | PMID: 17483347 | E-MEXP-958 | HG-U133A | Â |