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Table 4 DAVID functional clustering of Xl-PSIDs in the 10 th equal tally and 10 th equal intensity deciles

From: Probing the Xenopus laevis inner ear transcriptome for biological function

4A 10th Equal tally decile
GO terms   Number of DAVID IDs
  cellular process 366
  metabolic process 322
  primary metabolic process 287
  cellular metabolic process 278
  macromolecule metabolic process 204
  macromolecular complex 198
  cellular macromolecule metabolic process 190
  cytoplasmic part 190
  biosynthetic process 176
  protein metabolic process 175
  cellular biosynthetic process 171
  cellular protein metabolic process 161
  gene expression 138
  intracellular non-membrane-bounded organelle 137
  non-membrane-bounded organelle 137
  cellular macromolecule biosynthetic process 129
  macromolecule biosynthetic process 129
  structural molecule activity 118
  translation 112
  ribonucleoprotein complex 93
  structural constituent of ribosome 82
  Ribosome 82
  ribonucleoprotein 55
  ribosomal protein 54
  Ribosome 73
4B 10 th Equal intensity decile
GO terms   Number of DAVID IDs
  translation 26
  non-membrane-bounded organelle 26
  Intracellular non-membrane-bounded organelle 26
  structural constituent of ribosome 25
  Ribosome 25
  structural molecule activity 25
  ribonucleoprotein complex 25
  ribosomal protein 16
  ribonucleoprotein 15
  Ribosome 22
  1. The functional clusters with the highest DAVID enrichment scores are shown for Xl-PSIDs in the 10th equal tally (A) and the 10th equal intensity (B) decile. DAVID assigned 905 IDs to the 10th equal tally decile, resulting in 121 annotation clusters. DAVID assigned 35 IDs to the 10th equal intensity decile, resulting in 3 annotation clusters.